Isolation and Identification of Phenanthrene Degrading Marine Isolates from Indian Ocean

Authors

  • Swetha K Department of Microbiology, Hindustan College of Arts & Science, Chennai, 603103, Tamil Nadu, India
  • Illanjiam S Department of Microbiology, Hindustan College of Arts & Science, Chennai, 603103, Tamil Nadu, India
  • Uma Maheswari, M ARMATS Biotek Training and Research Institute, Guindy, Chennai, 600032, Tamil Nadu, India

DOI:

https://doi.org/10.55863/ijees.2024.0035

Keywords:

Hydrocarbon, Hydrocarbonoclastic bacteria, Phenanthrene, Bioremediation, Polycyclic Aromatic Hydrocarbons, 16s rRNA

Abstract

Marine water contamination by hydrocarbon and its by-products are currently a worldwide issue. Microorganisms that can ingest hydrocarbons for growth, sustenance, and metabolic processes, classified as Hydrocarbonoclastic bacteria are identified as promising biocontrol agents for the degradation of hydrocarbons. Thus, in the present study, an attempt was made to isolate hydrocarbonoclastic bacterial species that are capable of utilising and degrading Phenanthrene, a polycyclic aromatic hydrocarbon as the sole carbon source. A total of 16 bacterial isolates were obtained as pure cultures from the samples collected at varying depths of 3 to 3500 m from Indian Ocean by the sequential isolation process with Phenanthrene incorporated into the growth media. Growth specificity of the isolates was estimated by subjecting the isolates to different ranges of pH, salinity and temperature. Based on the specificity tests, 3 isolates were selected as potential candidates that can grow well in Phenanthrene. Further, molecular characterization of these isolates by 16s rRNA sequence revealed the identity as Alcanivorax dieselolei, Rhodococcus pyridinivorans and Halomonas titanicae.

 

 

References

Abbasi, M., Kafilzadeh, F., Sabokbar, A. and Haddadi, A. 2023. Biodegradation of phenanthrene polluted soil through native strains in the Darkhouvin oil field. Polycyclic Aromatic Compounds, 43(6), 5158-5171. https://doi.org/10.1080/10406638.2022.2097272

Aitken, M.A., Stringfellow, W.T., Nagel, R.D., Kazunga, C. and Chen, S. 1998. Characteristics of phenanthrene-degrading bacteria isolated from soils contaminated with polycyclic aromatic hydrocarbons. Canadian Journal of Microbiology, 44(8), 743-752. https://doi.org/10.1139/w98-06

Cerniglia, C.E. and Sutherland, J.B. 2010. Degradation of polycyclic aromatic hydrocarbons by fungi. Pp. 2079-2110. In: Timmis, K.N. (Eds.). Handbook of Hydrocarbon and Lipid Microbiology. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-540-77587-4_151

Das, N. and Chandran, P. 2011. Microbial degradation of petroleum hydrocarbon contaminants: An overview. Biotechnology Research International, 2011, 1-13. https://doi.org/10.4061/2011/941810

Dhar, K., Abinandan, S., Sana, T., Venkateswarlu, K. and Megharaj, M. 2023. Anaerobic biodegradation of phenanthrene and pyrene by sulfate-reducing cultures enriched from contaminated freshwater lake sediments. Environmental Research, 235, 116616. https://doi.org/10.1016/j.envres.2023.116616

Hazen, T.C., Prince, R.C. and Mahmoudi, N. 2016. Marine oil biodegradation. Environmental Science & Technology, 50, 2121-2129. https://doi.org/10.1021/acs.est.5b03333

Iwabuchi, T. 2022. Phenanthrene-degrading Sphingobium xenophagum are widely distributed in the western Pacific Ocean. Canadian Journal of Microbiology,

(5): 315-328. https://doi.org/10.1139/cjm-2021-0177

Kebede, G., Tafese, T., Ebrahim, M.A., Kamaraj, M and Assefa, F. 2021. Factors influencing the bacterial bioremediation of hydrocarbon contaminants in the soil: Mechanisms and impacts. Journal of Chemistry, 2021, art 9823362. https://doi.org/10.1155/2021/9823362

Kumar, G.A., Vijayakumar, L., Joshi, G., Magesh D., Dharani, G. and Kirubagaran, R. 2014. Biodegradation of complex hydrocarbons in spent engine oil by novel bacterial consortium isolated from deep sea sediment. Bioresource Technology, 170, 556-564. https://doi.org/10.1016/j.biortech.2014.08.008

Kumar, G.A., Rajan, N., Kirubagaran. R., and Dharani, G. 2019. Biodegradation of crude oil using self-immobilized hydrocarbonoclastic deep sea bacterial consortium. Marine Pollution Bulletin, 146: 741-750. https://doi.org/10.1016/j.marpolbul.2019.07.006

Kumar, G.A., Manisha, D., Nivedha, R.N., Sujitha, K., Magesh, P.D., Kirubagaran, R. and Dharani, G. 2023. Biodegradation of phenanthrene by piezotolerant Bacillus subtilis EB1 and genomic insights for bioremediation. Marine Pollution Bulletin, 194 (Pt B), 115151. https://doi.org/10.1016/j.marpolbul.2023.115151

Mai, Z., Wang, L., Li, Q., Sun, Y. and Zhang, S. 2021. Biodegradation and metabolic pathway of phenanthrene by a newly isolated bacterium Gordonia sp. SCSIO19801. Biochemical and Biophysical Research Communications, 585, 42-47. https://doi.org/10.1016/j.bbrc.2021.10.069

Manimekalai, D., Purushothaman, C., Alagarsamy, V., Padmavathy, P., Aanand, S., Aruna, S. and Srinivasan, A. 2017. Isolation and characterization of phenanthrene degrading bacteria from marine environment. Biochemical and Cellular Archives, 17, 229-237. https://www.connectjournals.com/pages/articledetails/toc026880

Marquez-Villa, J. M., Rodriguez-Sierra, J. C., Amtanus Chequer, N., Cob-Calan, N. N., Garcia-Maldonado, J. Q., Cadena, S. and Hernandez-Nunez, E. 2023. Phenanthrene degradation by photosynthetic bacterial consortium dominated by Fischerella sp. Life, 13(5), 1108. https://doi.org/10.3390/life13051108

Nzila, A., Sankara, S., Al-Momani, M. and Musa, M. 2018. Isolation and characterisation of bacteria degrading polycyclic aromatic hydrocarbons: Phenanthrene and anthracene. Archives of Environmental Protection, 44, 43-54. https://doi.org/10.1007/s00253-004-1614-6

Pedetta, A., Pouyte, K., Seitz, M.K.H., Babay, P.A., Espinosa, M.S., Costagliola, M. and Peressutti, S.R. 2013. Phenanthrene degradation and strategies to improve its bioavailability to microorganisms isolated from brackish sediments. International Biodeterioration & Biodegradation, 84, 161-167. https://doi.org/10.1016/j.ibiod.2012.04.018

Pourbabaee, A.A., Shahriari, M.H. and Garousin, H. 2019. Biodegradation of phenanthrene as a model hydrocarbon: Power display of a super-hydrophobic halotolerant enriched culture derived from a saline-sodic soil. Biotechnology Reports, 24, e00388. https://doi.org/10.1016/j.btre.2019.e00388

Sayed, K., Baloo, L. and Sharma, N.K. 2014. Bioremediation of total petroleum hydrocarbons (tph) by bioaugmentation and biostimulation in water with floating oil spill containment booms as bioreactor basin. The International Journal of Environmental Research and Public Health, 18(5), 2226. https://doi.org/10.3390/ijerph18052226

Tao, X., Lu, G., Dang, Z., Chen, Y. and Yi, X. 2007. A phenanthrene-degrading strain Sphingomonas sp. GY2B isolated from contaminated soils. Process Biochemistry, 42(3): 401-408. https://doi.org/10.1016/j.procbio.2006. 09.018

Tian, L., Ma, P. and Zhong, J. 2002. Kinetics and key enzyme activities of phenanthrene degradation by Pseudomonas mendocina. Process Biochemistry, 37(12), 1431-1437. https://doi.org/10.1016/S0032-9592(02)00032-8

Wang, J., Xu, H., An, M. and Yan, G. 2008. Kinetics and characteristics of phenanthrene degradation by a microbial consortium. Petroleum Science, 5, 73-78. https://doi.org/10.1007/s12182-008-0012-6

Yifei, Y., Zhixiong, Z., Luna, C., Qihui, C., Zuoyuan, W., Xinqi, L., Zhexiang, L., Fei, Z. and Xiujuan, Z. 2023. Marine pollutant Phenanthrene (PHE) exposure causes immunosuppression of hemocytes in crustacean species, Scylla paramamosain. Comparative Biochemistry and Physiology Part C: Toxicology & Pharmacology, 275, 109761. https://doi.org/10.1016/j.cbpc.2023.109761

Yin, C., Xiong, W., Qiu, H., Peng, W., Deng, Z., Lin, S. and Liang, R. 2020. Characterization of the Phenanthrene-degrading Sphingobium yanoikuyae SJTF8 in heavy metal co-existing liquid medium and analysis of its metabolic pathway. Microorganisms, 8(6), 946. https://doi.org/10.3390/microorganisms8060946

Downloads

Published

2024-02-07

How to Cite

K, S., S, I., & M, U. M. (2024). Isolation and Identification of Phenanthrene Degrading Marine Isolates from Indian Ocean . International Journal of Ecology and Environmental Sciences, 50(3), 385–391. https://doi.org/10.55863/ijees.2024.0035